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cobra toolbox v.3.0  (MathWorks Inc)


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    MathWorks Inc cobra toolbox v.3.0
    Cobra Toolbox V.3.0, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/cobra+toolbox+v%2E3%2E0/pmc11881132__sc4c09962_si_001-48-6-11
    Average 90 stars, based on 1 article reviews
    cobra toolbox v.3.0 - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

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    Article Title: Addressing genome scale design tradeoffs in Pseudomonas putida for bioconversion of an aromatic carbon source
    Article Snippet: COBRA Toolbox v.3.0 in MATLAB R2017b (Mathworks Inc., Natick, MA, USA) was used for FBA and Double Robustness analysis simulations with Gurobi Optimizer 10.0 ( http://www.gurobi.com/ ) as the solver.

    Article Title: Genetically modified bacterial cells and methods useful for producing indigoidine
    Article Snippet: COBRA Toolbox v.3.044 in MATLAB R2017b is used for FBA and FVA simulations with the GLPK (website for: gnu.org/software/glpk), an open-source linear optimization solver.

    Article Title: Engineering yeast mitochondrial metabolism for 3-hydroxypropionate production.
    Article Snippet: The simulations were performed in MATLAB using the Cobra toolbox v.3.0 [48], and the simulated flux distributions were then used to calculate the maximum theoretical yields.

    Article Title: Engineering yeast mitochondrial metabolism for 3-hydroxypropionate production
    Article Snippet: The simulations were performed in MATLAB using the Cobra toolbox v.3.0 [ ], and the simulated flux distributions were then used to calculate the maximum theoretical yields.

    Article Title: Bottlenecks in the Implementation of Genome Scale Metabolic Model Based Designs for Bioproduction from Aromatic Carbon Sources
    Article Snippet: COBRA Toolbox v.3.0 ( ) in MATLAB R2017b (Mathworks Inc., Natick, MA, USA) was used for FBA and Double Robustness analysis simulations with Gurobi Optimizer 8.1 ( http://www.gurobi.com/ ) as the solver.

    Combined Bisulfite Restriction Analysis Assay:

    Article Title: Microbial Pathways for Cost-Effective Low-Carbon Renewable Indigoidine
    Article Snippet: .. FBA simulations were performed using the COBRA Toolbox v.3.0 22 in MATLAB R2017b, with the GLPK (https://gnu.org/software/glpk) or Gurobi Optimizer 8.1 (http://www.gurobi.com/) as the linear optimization solver. ..

    Article Title: New Insights on Metabolic Features of Bacillus subtilis Based on Multistrain Genome-Scale Metabolic Modeling.
    Article Snippet: .. The COBRA ToolBox v.3.0 [57] running on the MatLab platform was used for FBA simulations. ..

    Article Title: New Insights on Metabolic Features of Bacillus subtilis Based on Multistrain Genome-Scale Metabolic Modeling
    Article Snippet: .. The COBRA ToolBox v.3.0 [ ] running on the MatLab platform was used for FBA simulations. ..



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